2009 Center Publications

Below are the Center publications. Use the options to the left to select the year and limit the type of publication you would like to view.

Peer Reviewed Journal Publications

Bae, E., Aroonnual, A., Bhunia, A. K., Robinson, J. P., Hirleman, E.D. System automation for a bacterial colony detection and identification instrument via forward scattering. Measurement Science and Technology. 2009. v. 20. p. 015082.
Banada, P. P., Huff, K., Bae, E., Rajwa, B., Bayraktar, B., Aroonnual, A., Adil, A., Robinson, J. P., Hirleman, E. D., Bhunia, A. K. Label-free detection of multiple bacterial pathogens using light scattering sensor. Biosensors and Bioelectronics. 2009. v. 24. p. 1685-1692.
Banerjee, P., Bhunia. A. K. Mammalian cell-based biosensors for pathogens and toxins. Trends in Biotechnology. 2009. v. 27. p. 179-188.
Banerjee, P., Merkel, G. J., Bhunia, A. K. Lactobacillus delbrueckii ssp. bulgaricus B-30892 can inhibit cytotoxic effects and adhesion of pathogenic Clostridium difficile to Caco-2 cells. Gut Pathogens. 2009. v. 1. p. 8.
Bhattacharya, S., Chanda, N., Liu, Y., Gangopadhyay, K., Bashir, R., Sharp, P. R., Gangopadhyay, S. Enhanced DNA separation rates in nano-platinum doped Agarose. Journal of Bionanosciences. 2008. v. 2. p. 1-8.
Bhattacharya, S., Gangopadhyay, D., Chanda, N., Grant, S. A., Liu, Y., Sharp, P. R., Bashir, R., Gangopadhyay, K., Gangopadhyay, S. Low voltage capillary electrophoresis using high conductivity agarose nano-platinum composites. Sensor Letters. 2008. v. 6. p. 1-6.
Bhattacharya, S., Salamat, S., Morisette, D., Banada, P., Akin, D., Liu, Y. S., Bhunia, A. K., Ladisch, M., Bashir, R. PCR-based detection in a micro-fabricated platform. Lab on a Chip. 2008. v. 8. p. 1130-1136.
Burgula, Y., Reuhs, B. L., Mauer, L. J. Rapid FT-IR methods for detection of Escherichia coli O157:H7 in fruit juices. World of Food Science. 2009. v. 3.
Burkholder, K. M., Bhunia, A. K. Salmonella enterica serovar Typhimurium adhesion and cytotoxicity during epithelial cell stress is reduced by Lactobacillus rhamnosus GG. Gut Pathogens. 2009. v. 1. p. 14.
Burkholder, K. M., Kim, K-P., Mishra, K., Medina, S., Hahm, B-K., Kim, H., Bhunia, A. K. Expression of LAP, an SecA2-dependent secretory protein, is induced under anaerobic environment. Microbes and Infection. 2009. v. 11. p. 859-867.
Geng, T., Bao, N., Gall, O.Z., Lu, C. Modulating DNA adsorption on silica beads using an electrical switch. Chemical Communications. 2009. p. 800-802.
Kim, G., Moon, J. H., Hahm, B. K., Morgan, M., Bhunia, A., Om, A. S. Rapid detection of Salmonella Enteritidis in pork samples with impedimetric biosensor: Effect of electrode spacing on sensitivity. Food Science and Biotechnology. 2009. v. 18. p. 89-94.
Koo, O. K., Salamat, S., Liu, Y., Ladisch, M. R., Bashir, R., Bhunia, A. K. Targeted capture of pathogenic bacteria using mammalian cell receptor on microfluidic chip. Analytical Chemistry. 2009. v. 81. p. 3094-3101.
Krishnamurthy, K., Tewari, J., Irudayaraj, J., Demirci, A. Microscopic and spectroscopic analysis of inactivation of Staphylococcus aureus by pulsed UV-light and infrared heating. Food and Bioprocess Engineering: An International Journal. 2008.
Lee, K., Irudayaraj, J. Periodic and dynamic 3-D gold nanoparticle-DNA network structures for surface-enhanced raman spectroscopy-based quantification. Journal of Physical Chemistry. 2009. v. 113. p. 5980-5983.
Liu, Y. S., Bashir. R. Electrical detection of DNA molecules. BMES Bulletin. 2008. v. 32. No. 3. p. 14-15.
Ravindranath, S., Mauer, L., Chitrita, D., Irudayaraj, J. Biofunctionalized magnetic nanoparticle integrated mid-infrared pathogen sensors for food matrices. Analytical Chemistry. 2009. v. 81. p. 2840-2846.
Stanciu, L., Won, Y. H., Ganesana, M., Andreescu, S. Magnetic particle-based hybrid platforms for bioanalytical sensors. Sensors. 2009. v. 9. p. 2976-2999.
Sun, L., Irudayaraj, J. Quantitative surface-enhanced raman for gene expression estimation. Biophysical Journal. 2009. v. 96. p. 4709-4716.
Valadez, A. M., Lana, C. A., S. I., Morgan, M. T., Bhunia, A. K. Evanescent wave fiber-optic biosensor for detection of Salmonella from food. Sensors. 2009. v. 9.
Wang, C., Irudayaraj, J. Gold nanorod probes detect multiple pathogens. Small. 2008. v. 4. p. 2204-2208.
Yang, L., Banada, P., Bhunia, A., Bashir, R. Effects of dielectrophoresis on the immuno-reactivity, the growth profile, and the viability of Listeria monocytogenes. Journal of Biological Engineering. 2008. v. 2:6.
Yang, L., Bashir, R. Electrical/electrochemical impedance for rapid detection of foodborne pathogenic bacteria. Review Article. Biotechnology Progress. Biotechnology Advances. 2008. v. 26. p. 135-150.
Zordan, M. D., Grafton, M. M. G., Acharya, G., Reece, L. M., Cooper, C. L., Aronson, A. I., Park, K., Leary, J. F. Detection of pathogenic E. coli O157:H7 by a hybrid microfluidic SPR and molecular imaging cytometry device. Cytometry Part A. 2009. v. 75A. p. 155-162.

Abstracts for major papers/posters presented

Bhunia, A. K. Food safety: Molecular and microbiological approaches to pathogen detection. International Symposium on Strategies for Technology Development for Ensuring Agro Food Safety. Seoul, Korea. July 8-9, 2009.
Bhunia, A. K., Hirleman, E. D., Rajwa, B., Robinson, J. P. Sample preparation and light scattering biosensors for pathogen detection. USDA-ARS-FSIS Joint Meeting. Shepherdstown, WV. February 17-18, 2009.
Bhunia, A. K., Hirleman, E. D., Rajwa, B., Robinson, J. P. The BARDOT system for pathogen detection. International Rapid Methods Workshop. Manhattan, KS. June 24, 2009.
Bhunia, A. K. Optical biosensors for multipathogen detection. AIChE Midwest Regional Conference. Chicago, IL. September 23, 2008.
Bhunia, A. K. Pathogen detection: From conventional to nanobiosensor methods. Seoul, Korea. July 10, 2009.
Bhunia, A. K. Pathogen detection technologies. AES Chemunex. Paris, France. January 29, 2009.
Davis, R., Burgula, Y., Deering, A., Irudayaraj, J., Reuhs, B. L., Mauer, L. J. Identification, enumeration, and differentiation of live and dead E. coli O157: H7 in ground beef using fourier transform infrared (FTIR) spectroscopy and a portable IR sensor. Institute of Food Technologists' Annual Meeting and Food Expo. Anaheim, CA. June 6-10, 2009.
Davis, R., Burgula, Y., Reuhs, B. L., Mauer, L. J. Detection of live and dead Salmonella enterica from chicken breast using filtration and Dynabeads assays followed by fourier transform infrared (FTIR) spectroscopy. Institute of Food Technologists' Annual Meeting and Food Expo. Anaheim, CA. June 6-10, 2009.
Deering, A. J., Reuhs, B. L., Mauer, L. J. Differentiation between live and dead bacterial cells using FT-IR spectroscopy and comparison of detection limits using quantitative PCR (qPCR). Institute of Food Technologists' Annual Meeting and Food Expo. Anaheim, CA. June 6-10, 2009.
Irudayaraj, J. Multiplex detection of pathogens by SERS and plasmonics. Nanorods and Microparticles in Homeland Security. American Chemical Society. Washington DC. August 16-21, 2009.
Jagadeesan, B., La, D., Kihara, D., Bhunia, A. K. N terminal Gly224-Gly411 domain in Listeria adhesion protein (LAP) interacts with receptor Hsp60. American Society for Microbiology General Meeting. Philadelphia, PA. May 17-21, 2009.
Koo, O. K., Jagadeesan, B., Burkholder, K., Liu, Y-S., Ladisch, M. R., Bashir, R., Linton, R., Bhunia, A. K. Mammalian cell receptor, Hsp60 on microfluidic biochip allows improved capture and detection of Listeria monocytogenes. Food Micro. Aberdeen, Scotland. September 1-4, 2008.
Ohk, S. H., Koo, O. K., Bhunia, A. K. Concurrent detection of Listeria monocytogenes, E. coli O157 and Salmonella enterica from artificially inoculated food samples with fiber-optic biosensor. Institute of Food Technologists Annual Meeting.
Paarlberg, K. R., Hanna, H. M., Erbach, D. C., Hartzler, R. G. Cultivator design for interrow weed control on no till corn. American Society for Agricultural Engineers. 1995.
Steinheimer, T. R. Chemical fate of herbicides within a small agricultural watershed. American Chemical Society. 1995.
Sun, L., Irudayaraj, J. Confocal raman-based nanoarray platform from multiplex detection using non-fluorescent tags. The 12th Annual Meeting of IBE. March 29-April 1 .
Yi-Shao, L., Banada, P. P., Bhunia, A. K., Bashir, R. Label-free detection of PCR amplification. The 7th IEEE Sensors Conference. Lecce, Italy. October 26 - 29, 2008.
Zordan, M. D., Grafton, M. G., Park, K., Leary, J. F. The design of a microfluidic biochip for the rapid, multiplexed detection of foodborne pathogens by surface plasmon resonance imaging. Submitted to the SPIE Photonics West Conference, San Francisco, CA. January 23-28, 2010.

Thesis/Dissertations

Jagadeesan, B. Molecular characterization of Listeria adhesion protein (LAP), an alcohol acetaldehyde dehydrogenase homologue involved in the adhesion of Listeria monocytogenes to intestinal epithelial cells. Ph.D. Dissertation. 2009. Purdue University. 127 p.

Books and Book Chapters

Kizil, R., Irudayaraj, J. Application of raman spectroscopy for food quality measurement. Irudayaraj, J., Reh, C. editors. IFT Press, Blackwell Publishing Professional, Ames, IA. Nondestructive Testing of Food Quality. 2008. p. 143-164.
Kizil, R., Irudayaraj, J. FT-raman spectroscopy for food and biomaterial characterization. Irudayaraj, J., Christoph, editors. IFT Press, Blackwell Publishing Professional, Ames, IA. Nondestructive Sensing for Food Quality. 2007.
Yang, L., Cheng, X., Liu, Y., Bashir, R. Lab-on-a-chip impedance detection of microbial and cellular activity. Yaakov, N., Bhatia, S., editors. Artech House, Boston, MA. Microdevices in Biology and Medicine (Methods in Bioengineering Book Series). 2009.

Articles in Popular Press

Bhunia, A. K. Chip can make sure safe food products aren't unduly discarded. Purdue University News Service. March 27, 2009.
Bhunia, A. K. New technique for L. monocytogenes detection. Food Quality eNewsletter. Available: eNews@wiley.com. May 13, 2009.

Patents Granted

Gomez, R., Bashir, R. Biosensor and related method. U.S. Patent 7,435,579.
Multiplex biosensor using gold nanostructures. U.S. Provisional Patent Application 64803.P1.US.
Purdue Research Foundation. Identity profiling of cell surface markers. U.S. Provisional Patent Application 64892.P2.US.

Invited Lectures and Seminars

Bashir, R. Bacterial detection on a chip. Harvard/MGH CIMIT Summer Education Series. July 16th, 2008.
Bashir, R. Bionanoelectronic sensing on a chip. NSF-Sponsored GEM4 Summer School on Cellular and Molecular Mechanics. Urbana-Champagne, IL. June 8-19, 2009.
Bashir, R. Interfacing life sciences and engineering at the micro- and nanoscale. Invited. Nanotechnology Seminar Series. Nashville, TN. April 15th, 2009.
Bashir, R., Liu, Y. S., Akin, D., Elibol, O. H., Reddy, J., Park, K. Interfacing silicon, biology, and medicine at the micro- and nanoscale: Opportunities and prospects. Invited. BioMEMS Topical Session at the AVS 55th International Symposium & Exhibition. Boston, MA. October 19-24, 2008.
Bhunia, A. K. Biosensor based methods in food safety and biosecurity applications. Keynote lecture. International Fermented Food Expo (IFFE). Jeonju, Jeonbuk, Korea. October 24-25, 2008.
Bhunia, A. K. Biosensors and bio-based methods for the separation and detection of foodborne pathogens. Plenary Talk. Rapid Methods Europe. Noordwijkerhout, The Netherlands. January 26-28, 2009.
Bhunia, A. K. Multipathogen detection strategies using biosensors. Plenary Talk. Food Micro. Aberdeen, Scotland, UK. September 1-4, 2008.
Bhunia, A. K. Pathogen detection: From conventional to nanobiosensor approaches. Plenary talk. 49th Annual Meeting of the Association of Microbiologist of India. Delhi, India. November 18-20, 2008.
Davis, R., Reuhs, B. L., Mauer, L. J. Detection of Escherichia coli O157:H7 in ground beef using fourier transform infrared (FT-IR) spectroscopy coupled with filtration and Dynabeads assays. CFSE/USDA 10th Annual Research Workshop. Philadelphia, PA. November 2008.
Deering, A. J., Mauer, L. J. Infrared spectroscopy applications for pathogen detection. Rapid Methods Workshop. Manhattan, KS. June 2009.
Deering, A. J., Reuhs, B. L., Mauer, L. J. Differentiation between live and dead bacterial cells using FT-IR spectroscopy and verification using quantitative PCR (qPCR). CFSE/USDA 10th Annual Research Workshop. Philadelphia, PA. November 2008.
Ladisch, M., Bhunia, A., Bashir, R., Linton, R. Engineering of biosystems for the detection of Listeria monocytogenes in foods-Development of a biochip. Manhattan, KS. June 18, 2008.
Ladisch, M., Bhunia, A., Bashir, R., Robinson, P., Linton, R. Bioseparation and concentration techniques used to improve food sampling. Manhattan, KS. June 24, 2009.
Linton, R., Ladisch, M., Bhunia, A. Detection and control of foodborne hazards. USDA Food Safety Meeting. Shepardstown, W.V. February, 25, 2009.

Proceedings

Bae, E., Bai, N., Aroonnual A., Bhunia, A. K., Robinson, J. P., Hirleman, E. D. Prediction of the light scattering patterns from bacterial colonies by a time-resolved reaction-diffusion model and scalar diffraction theory. Proceedings of SPIE. 2009. v. 7315.
Bai, N., Bae, E., Aroonnual A., Bhunia, A. K., Robinson, J. P., Hirleman, E. D. Development of a real-time system of monitoring the bacterial growth and registering the forward scattering pattern. Proceedings of SPIE. 2009. v. 7315.
Rajwa, B., Dundar, M., Patsekin, V., Huff, K., Bhunia, A. K., Venkatapathi, M., Bae, E., Hirleman, E., Robinson, J. P. Morphotypic analysis and classification of bacteria and bacterial colonies using laser light-scattering, pattern recognition, and machine-learning system. Proceedings of SPIE. 2009. v. 7306.
Zordan, M. D., Grafton, M. M., Acharya, G., Reece, L. M., Aronson, A. I., Park, K., Leary, J. F. A microfluidic-based hybrid SPR/molecular imaging biosensor for the multiplexed detection of food-borne pathogens. Proceedings of SPIE. 2009. v. 7167. p. 716706-716706-10.